Nanoparticles (NPs) are increasingly being used in different branches of science and in industrial applications; however, their rapid detection and characterization at low concentration levels have remained a challenge; more specifically, there is no single technique that can characterize the physicochemical properties of NPs (e.g. composition and size). In this work we have developed a colorimetric sensor array for defining the physicochemical properties of NPs in aqueous solution with ultra-low concentrations (e.g. 10−7g ml−1 for gold NPs). Various NPs were readily identified using a standard chemometric approach (i.e. hierarchical clustering analysis), with no misclassifications over 400 trials.