We investigate the separability of the Klein-Gordon equation on near horizon of d-dimensional rotating Myers-Perry black hole in two limits: (i) generic extremal case and (ii) extremal vanishing horizon case. In the first case, there is a relation between the mass and rotation parameters so that black hole temperature vanishes. In the latter case, one of the rotation parameters is restricted to zero on top of the extremality condition. We show that the Klein-Gordon equation is separable in both cases. Also, we solved the radial part of that equation and discuss its behavior in small- and large-r regions.