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Mohammad Hossein Fatemi

Mohammad Hossein Fatemi

Academic rank: Professor
ORCID:
Education: PhD.
ScopusId:
Faculty: Faculty of Chemistry
Address: http://rms.umz.ac.ir/~mhfatemi/en/
Phone: 01135342931

Research

Title
Prediction of Log IGCfor Benzene Derivatives to CiliateTetrahymena pyriformisfrom Their Molecular Descriptors
Type
JournalPaper
Keywords
QSAR, ANN, Molecular descriptor, IGC50
Year
2010
Journal Bulletin of the Chemical Society of Japan
DOI
Researchers Mohammad Hossein Fatemi ، Hanie Malekzade

Abstract

The purpose of this study was to develop the structure­toxicity relationships for a large group of organic compounds including 392 substituted benzenes to the ciliate Tetrahymena pyriformis (Log(IGC50)¹1) using interpretable molecular descriptors. These descriptors were calculated using DRAGON and CODESSA software. Multiple linear regression and artificial neural network methods were used as linear and nonlinear feature-mapping techniques. The best obtained model was derived by MLR with seven descriptors which are: the molecular weight, the radial distribution function, the Kier shape index, the 26th component of atom-centered descriptors type of R­CX­R, the topographic electronic index, the H atoms attached to CO groups, the 24th component of atom-centered descriptors of R­CH­R. These descriptors can encode different features of molecules which are responsible for their steric, electronic, and lipophilicity interactions. The best obtained model had statistics of R2 = 0.822, F = 1386.806, and SE = 0.312 for training and R2 = 0.815, F = 361.384, and SE = 0.337 for prediction. The presented model shows better statistical parameters in comparison with a previous model. The reliability of the model was evaluated by using the leave-many-out cross-validation method (Q2 = 0.819 and SPRESS = 0.32) as well as by y-scrambling